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All current and withdrawn HGNC gene symbols and Excel-mogrified symbols

Source: R/data.R
hgnc.table.Rd

A data.frame with the first column providing a gene symbol or known alias (including withdrawn symbols), second column providing the approved HGNC human gene symbol.

  • Symbol: All valid, Excel-mogrified, and withdrawn symbols

  • Approved.Symbol: Approved symbols

Usage

hgnc.table

Format

An object of class data.table (inherits from data.frame) with 103744 rows and 3 columns.

Source

Extracted from ftp://ftp.ebi.ac.uk/pub/databases/genenames/new/tsv/hgnc_complete_set.txt and system.file("extdata/mog_map.csv", package="HGNChelper")

Examples

data("hgnc.table", package="HGNChelper")
head(hgnc.table)
#>        Symbol Approved.Symbol chromosome
#>        <char>          <char>     <char>
#> 1:       A1BG            A1BG         19
#> 2: NCRNA00181        A1BG-AS1         19
#> 3:   A1BG-AS1        A1BG-AS1         19
#> 4:     A1BGAS        A1BG-AS1         19
#> 5:    A1BG-AS        A1BG-AS1         19
#> 6:   FLJ23569        A1BG-AS1         19