Access to a resource of datasets with biological ground truth for benchmarking differential abundance methods. The datasets are available from Zenodo: https://doi.org/10.5281/zenodo.6911026

Installation

## Install BioConductor if not installed
if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## Release version (not yet in Bioc)
BiocManager::install("MicrobiomeBenchmarkData")

## Development version
BiocManager::install("waldronlab/MicrobiomeBenchmarkData", build_vignettes = TRUE)

Links