List BEDsets — bb_list_bedsets • bedbaser

List BEDsets available through bedhost. By default uses the bedhost default of 1000 records and an initial offset of 0.

bb_list_bedsets(bedbase, query = "", limit = 1000, offset = 0)

Arguments

bedbase: BEDbase() object
query: character() (default "") keyword
limit: integer(1) (default 1000) maximum records
offset: integer(1) (default 0) page token of records

Value

tibble of BEDset records

Examples

bedbase <- BEDbase()
#> 168207 BED files available.
bb_list_bedsets(bedbase)
#> # A tibble: 1,000 × 9
#> # Groups:   id, name, md5sum, submission_date, last_update_date, description,
#> #   author, source [1,000]
#>    id        name   md5sum submission_date last_update_date description bed_ids 
#>    <chr>     <chr>  <chr>  <chr>           <chr>            <chr>       <list>  
#>  1 gse120532 gse12… cd04e… 2025-05-22T21:… 2025-05-22T21:3… "Data from… <tibble>
#>  2 gse115319 gse11… c34bc… 2025-05-22T21:… 2025-05-22T21:3… "Data from… <tibble>
#>  3 gse116831 gse11… 94fc3… 2025-05-22T21:… 2025-05-22T21:3… "Data from… <tibble>
#>  4 gse117595 gse11… 1b8ba… 2025-05-22T21:… 2025-05-22T21:3… "Data from… <tibble>
#>  5 gse93757  gse93… 702e6… 2025-05-23T20:… 2025-05-23T20:4… "Data from… <tibble>
#>  6 gse115363 gse11… 3cf6a… 2025-05-22T21:… 2025-05-22T21:4… "Data from… <tibble>
#>  7 gse152735 gse15… 63ab8… 2025-05-22T21:… 2025-05-22T21:4… "Data from… <tibble>
#>  8 gse109942 gse10… 8fa20… 2025-05-22T21:… 2025-05-22T21:4… "Data from… <tibble>
#>  9 gse110050 gse11… 2a58c… 2025-05-22T21:… 2025-05-22T21:5… "Data from… <tibble>
#> 10 gse188141 gse18… 5c0bd… 2025-05-25T10:… 2025-05-25T10:0… "Data from… <tibble>
#> # ℹ 990 more rows
#> # ℹ 2 more variables: author <chr>, source <chr>