Displaying BugSigDB signatures pages in a web browser

Source: R/html.R

Functionality for programmatically displaying microbe signatures on BugSigDB signature pages.

browseSignature(sname)

Arguments

sname

character. Signature name. Expected to start with a prefix of the form "bsdb:<X>/<Y>/<Z>_" encoding the corresponding BugSigDB signature ID.

Value

The URL of the selected BugSigDB signature page. If interactive, opens the URL in the default web browser.

References

BugSigDB: https://bugsigdb.org

Examples


  sname <- "bsdb:215/1/1_eczema:infant-with-eczema_vs_healthy-control_UP"
  browseSignature(sname)
#> [1] "https://bugsigdb.org/Study_215/Experiment_1/Signature_1"