Package index • SingleCellMultiModal

All functions

CITEseq(): CITEseq

GTseq(): Parallel sequencing data of single-cell genomes and transcriptomes

SCoPE2(): Single-cell RNA sequencing and proteomics

SingleCellMultiModal-package: SingleCellMultiModal-package

SingleCellMultiModal(): Combining Modalities into one MultiAssayExperiment

addCTLabels(): addCTLabels

getCellGroups(): getCellGroups

ontomap(): Obtain a map of cell types for each dataset

scMultiome(): Single-cell Multiome ATAC + Gene Expression

scNMT(): Single-cell Nucleosome, Methylation and Transcription sequencing

scmmCache() setCache() removeCache(): Manage cache / download directories for study data

seqFISH(): Single-cell spatial + Gene Expression