Edit the taxa names by mia

Source: R/utils.R

editMiaTaxaNames corrects the taxonomic names of the agglomerateByRank function of the mia package. This is used in the vignette of the Ravel dataset with bacterial vaginosis data.

editMiaTaxaNames(x)

Arguments

x

A TreeSummarizedExperiment agglomerated by the agglomerateByRank function of the mia package.

Value

A character vector with new names