#humble-brag

2021-03-03

Aedin Culhane (00:34:05): > @Aedin Culhane has joined the channel

Aedin Culhane (00:34:05): > set the channel description: Announce your contributions, awards, grants, talks, achievements, “today I learnt”, link to your blog, package, gist, self-promotion is welcome here! Bioconductor “greatest hit”, achievements. We want to celebrate your baby steps and giant leaps

Stephanie Hicks (00:37:12): > @Stephanie Hicks has joined the channel

Vince Carey (00:37:12): > @Vince Carey has joined the channel

Levi Waldron (00:37:12): > @Levi Waldron has joined the channel

Wolfgang Huber (00:37:13): > @Wolfgang Huber has joined the channel

saskia (00:37:13): > @saskia has joined the channel

Matt Ritchie (00:37:14): > @Matt Ritchie has joined the channel

Simina Boca (00:37:14): > @Simina Boca has joined the channel

Sean Davis (00:37:14): > @Sean Davis has joined the channel

Susan Holmes (00:37:14): > @Susan Holmes has joined the channel

Kozo Nishida (00:37:14): > @Kozo Nishida has joined the channel

Erica Feick (00:37:14): > @Erica Feick has joined the channel

Laurent Gatto (00:37:14): > @Laurent Gatto has joined the channel

Helena L. Crowell (00:37:14): > @Helena L. Crowell has joined the channel

Charlotte Soneson (00:37:14): > @Charlotte Soneson has joined the channel

Leonardo Collado Torres (00:37:14): > @Leonardo Collado Torres has joined the channel

Marcel Ramos Pérez (00:37:15): > @Marcel Ramos Pérez has joined the channel

Lori Shepherd (00:37:15): > @Lori Shepherd has joined the channel

Aaron Lun (00:37:15): > @Aaron Lun has joined the channel

Martin Morgan (00:37:15): > @Martin Morgan has joined the channel

Qian Liu (00:37:15): > @Qian Liu has joined the channel

Rafael Irizarry (00:37:15): > @Rafael Irizarry has joined the channel

Shila Ghazanfar (00:38:43): > @Shila Ghazanfar has joined the channel

Michael Love (00:38:43): > @Michael Love has joined the channel

Kasper D. Hansen (00:38:43): > @Kasper D. Hansen has joined the channel

Benilton S Carvalho (00:39:33): > @Benilton S Carvalho has joined the channel

Yagoub Ali Ibrahim Adam (00:39:33): > @Yagoub Ali Ibrahim Adam has joined the channel

Johannes Rainer (00:39:33): > @Johannes Rainer has joined the channel

Davide Risso (01:14:02): > @Davide Risso has joined the channel

Luke Zappia (02:45:37): > @Luke Zappia has joined the channel

Alexander Toenges (02:52:00): > @Alexander Toenges has joined the channel

Will Macnair (02:56:06): > @Will Macnair has joined the channel

Hector Climente (02:59:23): > @Hector Climente has joined the channel

Lluís Revilla (03:08:57): > @Lluís Revilla has joined the channel

Federico Marini (04:33:31): > @Federico Marini has joined the channel

Stuart Lee (04:38:56): > @Stuart Lee has joined the channel

Sebastian Worms (05:01:09): > @Sebastian Worms has joined the channel

David Zhang (05:01:20): > @David Zhang has joined the channel

Kevin Blighe (05:44:00): > @Kevin Blighe has joined the channel

Sanchit Saini (06:13:46): > @Sanchit Saini has joined the channel

Wynn Cheung (06:44:20): > @Wynn Cheung has joined the channel

Gabriele Sales (07:53:18): > @Gabriele Sales has joined the channel

Lukas Weber (07:53:50): > @Lukas Weber has joined the channel

rohitsatyam102 (08:13:28): > @rohitsatyam102 has joined the channel

Spencer Nystrom (08:28:37): > @Spencer Nystrom has joined the channel

Jenny Drnevich (09:03:22): > @Jenny Drnevich has joined the channel

Abhijeet Sonawane (09:05:33): > @Abhijeet Sonawane has joined the channel

Liz Ing-Simmons (09:11:38): > @Liz Ing-Simmons has joined the channel

Krutika (09:15:24): > @Krutika has joined the channel

Frederick Tan (09:22:04): > @Frederick Tan has joined the channel

mirna (10:26:11): > @mirna has joined the channel

Kevin Blighe (18:49:03): > Maybe I’ll start it off? My first Bioconductor package,EnhancedVolcano, now has 110 citations (according to Google Scholar) in just over 2 years. It’s never been published and doesn’t even appear as a pre-print. It does somewhat piggy-back on DESeq2 though (thanks@Michael Love) > Huge thanks to co-developers Sharmila Rana (now working at imperial College London) and Myles Lewis (Rheumatologist working in London)

Stephanie Hicks (19:16:27): > That’s awesome@Kevin Blighe!

Michael Love (19:59:40): > That’s very awesome@Kevin Blighe– why not preprint?

Stephanie Hicks (21:32:21): > I’ll follow up with a#humble-bragfor@Ariel Hippenfrom@Casey Greene’s group! She has submitted her first R package (miQC) to:bioc:and posted a:biorxiv:preprint on it today. Congratulations to@Ariel Hippenand other co-authors including@Lukas Weberhttps://www.biorxiv.org/content/10.1101/2021.03.03.433798v1

2021-03-04

Almut (03:45:17): > @Almut has joined the channel

Michael Lawrence (10:28:57): > @Michael Lawrence has joined the channel

Aedin Culhane (20:42:48) (in thread): > maybe F1000 Bioconductor channel?

2021-03-05

Jim Hunter (05:01:46): > @Jim Hunter has joined the channel

Mike Smith (05:03:24): > @Mike Smith has joined the channel

Ludwig Geistlinger (11:49:47): > @Ludwig Geistlinger has joined the channel

2021-03-07

Dror Berel (23:44:44): > @Dror Berel has joined the channel

2021-03-08

Tyrone Chen (01:10:05): > @Tyrone Chen has joined the channel

margherita mutarelli (05:38:36): > @margherita mutarelli has joined the channel

Pablo Rodriguez (06:42:16): > @Pablo Rodriguez has joined the channel

2021-03-11

Kevin Stachelek (09:03:55): > @Kevin Stachelek has joined the channel

2021-03-12

Gwen (09:30:21): > @Gwen has joined the channel

2021-03-15

Gian Marco Franceschini (05:38:10): > @Gian Marco Franceschini has joined the channel

2021-03-31

Kelly Street (12:56:45): > @Kelly Street has joined the channel

2021-04-06

Daniela Cassol (12:07:13): > @Daniela Cassol has joined the channel

2021-04-13

Lori Shepherd (10:02:09): > Nominations for Bioconductor 2021 Awards now Open. SeeAwards pagefor more details or fill out thisnomination form. Self nominations accepted. Deadline for nominations is May 31, 2021 - Attachment (Google Docs): Bioconductor Awards 2021 > Nomination form for the Bioconductor Awards (see https://bioconductor.org/about/awards/ for more details). Please fill out all the fields in the following sections. In the Nominator section, please provide your own contact information in case we need to contact you with any question. In the Nominee section, please indicate how the nominee provides outstanding contributions for each of the selected nomination criteria. Four awards will be given using the selected criteria as justification.

2021-05-11

Megha Lal (16:45:06): > @Megha Lal has joined the channel

2021-05-22

Moritz E. Beber (16:01:17): > @Moritz E. Beber has joined the channel

2021-05-25

Quang Nguyen (12:19:19): > @Quang Nguyen has joined the channel

2021-06-15

Martin Morgan (16:18:54): > Not sure how to phrase this as a humble brag, but the American Statistical Association COPSS awards are an incredibly prestigious early career award in statistics and data science. Stephanie Hicks is a recipienthttps://magazine.amstat.org/blog/2021/05/01/2021-copss-award-winners/. What a great honor, congratulations@Stephanie Hicks

Davide Risso (17:03:51): > Congratulations@Stephanie Hicks! Very well deserved!

Stephanie Hicks (19:46:23): > Thank you@Martin Morganand everyone!:heart:

Simina Boca (19:57:25): > Awesome@Stephanie Hicks! So well deserved!

2021-06-16

Michael Love (03:48:05): > Amazing! Very well deserved indeed!

Laurent Gatto (05:00:24): > Congratulations !

Sebastian Worms (11:19:32): > Wow, congratulations!

Lori Shepherd (11:20:13): > congratulations!!

2021-07-21

Aedin Culhane (21:05:32): > Excited our BIRS single cell data integration workshop & hackathon was featured in Naturehttps://nature.com/articles/d41586-021-01994-wThe R code and data are on githubhttps://github.com/BIRSBiointegration… > Videos, slides of talks athttps://birs.ca/events/2020/5-day-workshops/20w5197 - Attachment (birs.ca): 20w5197: Mathematical Frameworks for Integrative Analysis of Emerging Biological Data Types (Online) | Banff International Research Station > Workshop at the Banff International Research Station in Banff, Alberta between Jun 14 and Jun 19, 2020: Mathematical Frameworks for Integrative Analysis of Emerging Biological Data Types (Online).

2021-07-22

Stephanie Hicks (06:59:46): > Congratulations@Aedin Culhane!!

Alexander Toenges (08:59:45): > @Alexander Toenges has left the channel

2021-07-23

Batool Almarzouq (15:53:01): > @Batool Almarzouq has joined the channel

2021-08-21

rohitsatyam102 (09:23:05): > Yay!!@Aedin CulhaneCongratulations for winning the Best Workshop category in BioC 2021 and@Federico Marinifor GeneTonic!!:tada::tada::tada::confetti_ball::confetti_ball::confetti_ball: - File (JPEG): Screenshot_2021-08-21-18-50-34-65_e307a3f9df9f380ebaf106e1dc980bb6.jpg

rohitsatyam102 (09:24:03) (in thread): > I thoroughly enjoyed it and PCA was never that clear to me before!!

2021-08-26

Aedin Culhane (09:30:30) (in thread): > So so kind. Sorry for the woeful internet connection.

2021-09-16

Henry Miller (18:35:08): > @Henry Miller has joined the channel

2021-10-14

Wolfgang Huber (10:24:08): > @Wolfgang Huber has left the channel

2021-10-15

Wes W (11:01:06): > @Wes W has joined the channel

2021-11-08

Paula Nieto García (03:27:42): > @Paula Nieto García has joined the channel

2022-01-28

Megha Lal (11:13:14): > @Megha Lal has left the channel

2022-03-15

Lori Shepherd (10:39:32): > BiocAwards 2022 nomination is now open. Please seehttp://bioconductor.org/about/awards/

2022-07-28

Will t (09:46:47): > @Will t has joined the channel

2022-08-11

Rene Welch (17:15:22): > @Rene Welch has joined the channel

2022-10-31

Chenyue Lu (10:05:00): > @Chenyue Lu has joined the channel

2022-12-09

Mike Smith (08:16:01): > @Mike Smith has left the channel

2022-12-12

Lexi Bounds (17:58:45): > @Lexi Bounds has joined the channel

2023-01-24

Maria Doyle (10:49:59): > @Maria Doyle has joined the channel

Maria Doyle (10:51:00): > ICYMI we have the first instructor certified from our Bioconductor Carpentries training program:tada::simple_smile:https://twitter.com/Bioconductor/status/1617828642029031424 - Attachment (twitter): Attachment > I’m proud to share that I’ve become a Carpentries-certified instructor thanks to a scholarship offered by @Bioconductor :partying_face: > > I’d like to thank @Bioconductor for the opportunity and @thecarpentries for the amazing training. > > Looking forward to expanding our #education community!

2023-04-17

Lori Shepherd (14:14:36): > Nominations for Bioconductor 2023 Awards are now open. Bioconductor is excited to announce an opportunity to recognize those making significant outstanding contributions to the Bioconductor community. The Bioconductor project is announcing the call for Bioconductor Awards, honoring various forms of contributions to the project. Four awardees will be selected, each having contributed to the project in an outstanding way based on one or more of selection criteria. More information and details foundhttps://bioconductor.org/about/awards/and the nomination form can be found athttps://forms.gle/gPzmH8ewHNHWckdv6. The deadline for nominations is May 31, 2023. The awardee’s will be recognized at the annual Bioc2023 conference August 2-4. - Attachment (Google Docs): Bioconductor Awards 2023 > Nomination form for the Bioconductor Awards (see https://bioconductor.org/about/awards/ for more details). > > Please fill out all the fields in the following sections. > > In the Nominator section, please provide your own contact information in case we need to contact you with any question. > > In the Nominee section, please indicate how the nominee provides outstanding contributions for each of the selected nomination criteria. Four awards will be given using the selected criteria as justification.

2023-05-04

Aedin Culhane (15:09:41): > Congrats mariahttps://www.siliconrepublic.com/innovation/bioinformatics-university-limerick-maria-doyle - Attachment (Silicon Republic): Bioinformatics, data and the value of open science > Dr Maria Doyle demystifies bioinformatics and explains just some of the many applications for this multidisciplinary field.

2023-08-03

Ritika Giri (15:58:05): > @Ritika Giri has joined the channel

2023-08-04

Ray Su (10:49:00): > @Ray Su has joined the channel

2023-09-07

Roy Storey (22:52:33): > @Roy Storey has joined the channel

2023-09-15

Leo Lahti (04:55:04): > @Leo Lahti has joined the channel

2023-09-18

Y-h. Taguchi (09:07:10): > @Y-h. Taguchi has joined the channel

2024-01-27

atongsa miyamoto (04:51:29): > @atongsa miyamoto has joined the channel

2024-02-21

Maria Doyle (07:39:18): > :trophy:Nominate for the Bioconductor Awards 2024!:trophy:We invite you to nominate individuals making outstanding contributions to our community. > This is your chance to honour their hard work and achievements!:star2:Criteria: Significant contributions in one or more ways to the project:busts_in_silhouette:Selection: 4 awardees based on impact:date:Deadline: May 15, 2024 > > Nominate Now:Nomination FormLearn More:Awards DetailsRecognise their impact: Nominate someone who’s making our community better. - File (PNG): BiocAwards (1).png

Michael Love (08:07:34): > > 2023: Holmes, Ritchie, Ahlmann-Eltze, Bell > > 2022: Sean Davis, Erica Feick, Nicole Kramer, Hervé Pagès > > 2021: Aedin Culhane, Laurent Gatto, James MacDonald, Charlotte Soneson, Leonardo Collado-Torres > > 2020: Helena Crowell, Aaron Lun, Lori Shepherd, Gordon Smyth

2024-04-18

Weston Elison (15:54:20): > @Weston Elison has joined the channel

2024-05-15

Sunil Nahata (08:31:27): > @Sunil Nahata has joined the channel

2024-07-05

Margherita (12:29:12): > @Margherita has joined the channel

2024-07-26

Qiwen Octavia Huang (19:52:18): > @Qiwen Octavia Huang has joined the channel

2024-08-19

Rema Gesaka (09:41:10): > @Rema Gesaka has joined the channel

2024-09-13

Gobi Dasu (18:20:27): > @Gobi Dasu has joined the channel

2025-04-17

dhvani solanki (16:17:27): > @dhvani solanki has joined the channel